PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG017980.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 278aa    MW: 30601.3 Da    PI: 6.3139
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG017980.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding422.2e-132266347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+ l++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC3BG017980.5 22 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 66
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
SDDPMHASCS TNGRAERKKG TPWTEEEHRL FLLGLQKLGK GDWRGISRSF VVSRTPTQVA  60
SHAQKYFIRQ TNFSRRKRRS SLFDMVPEMP MDESPDGTEE FMLCGTQDES TSSNKLSLFH  120
LERQKEAECD KDLPTLQLRQ HEESEYAGPS LEAPDLEMNN GVSFKTTSVS TVPAFYPALL  180
PVPLTLWPAN VSNVEASNAT HEVLKPTPVN LKEAIKADEV VSMSKLSIGG GSSGSMEPSA  240
LSLQLTGPTN TRQSAFHVSP PMTRTDLSQG NNSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.19e-45MYB_related family protein