PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG017980.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 289aa    MW: 31602.4 Da    PI: 6.3151
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG017980.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-133377347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+ l++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC3BG017980.2 33 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 77
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
RGGGEGAPGY VSDDPMHASC STNGRAERKK GTPWTEEEHR LFLLGLQKLG KGDWRGISRS  60
FVVSRTPTQV ASHAQKYFIR QTNFSRRKRR SSLFDMVPEM PMDESPDGTE EFMLCGTQDE  120
STSSNKLSLF HLERQKEAEC DKDLPTLQLR QHEESEYAGP SLEAPDLEMN NGVSFKTTSV  180
STVPAFYPAL LPVPLTLWPA NVSNVEASNA THEVLKPTPV NLKEAIKADE VVSMSKLSIG  240
GGSSGSMEPS ALSLQLTGPT NTRQSAFHVS PPMTRTDLSQ GNNSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.11e-46MYB_related family protein