PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG017980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 290aa MW: 31673.5 Da PI: 6.3151 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.9 | 2.4e-13 | 34 | 78 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++lG+g+W+ I+r + Rt+ q+ s+ qky TRIDC3BG017980.1 34 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 78 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
ARGGGEGAPG YVSDDPMHAS CSTNGRAERK KGTPWTEEEH RLFLLGLQKL GKGDWRGISR 60 SFVVSRTPTQ VASHAQKYFI RQTNFSRRKR RSSLFDMVPE MPMDESPDGT EEFMLCGTQD 120 ESTSSNKLSL FHLERQKEAE CDKDLPTLQL RQHEESEYAG PSLEAPDLEM NNGVSFKTTS 180 VSTVPAFYPA LLPVPLTLWP ANVSNVEASN ATHEVLKPTP VNLKEAIKAD EVVSMSKLSI 240 GGGSSGSMEP SALSLQLTGP TNTRQSAFHV SPPMTRTDLS QGNNSPIHAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16350.1 | 1e-46 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG017980.1 |