PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG017650.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 387aa    MW: 41379.3 Da    PI: 7.8032
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG017650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.54.8e-08122142526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                        C++f++ G Ck+Gd C +aHg
  TRIDC3BG017650.2 122 ACPDFRK-GGCKRGDACEYAHG 142
                       7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MMMMSEGVSV PPWGNHLPVS GVDAGGGGGG DETPFLFAAL RQYLPCNDVL GGAGAGAEDE  60
DEAAAMAAAV DAYACDEFRM YDFKVRRCAR GRSHDWTECP FAHPGEKARR RDPRKYHYSG  120
TACPDFRKGG CKRGDACEYA HGVFECWLHP ARYRTQPCKD GTACRRRVCF FAHTPDQLRA  180
MPSQHSSPRS TPLSPLAESY DGSPLRRQAF ESYLSKSIMS SSPTSTLLSS PPKSPPSESP  240
PLSPDGAASF RRGSCGSWPG VGSPVNDVLA SLRQLRLAKA QASPSGGWSG YPTSPAAYGS  300
PKAAGFYSLP TTPMGTQTGA SSFMPNLEPL NLRFLDDGEP VQRVESGRAL REKVFERLSR  360
DGAAPRSCEV GAGAGGPDVG WVSDLIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.13e-82C3H family protein