PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG016050.28 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 26489.6 Da PI: 9.039 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.2e-18 | 62 | 111 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAa+a++ a+++++g TRIDC3BG016050.28 62 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 111 59****999.**********8...2.359***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
RLRKKKVRRR STGPDSVAET IKKWKEENQK LLQENGSRKA PAKGSKKGCM AGKGGPENSN 60 CAYRGVRQRT WGKWVAEIRE PNRGNRLWLG SFPTAVEAAR AYDDAARAMY GAKARVNFSE 120 QSPDASSGCT LAPPLLMSNG ATAASHPSDG KDESESAGTV AHKVKKEVSN DLRSTHEEHK 180 TLEVSQPKGK ALHKEANVSY DYFNVEEVLD MIIVELSADV KMEAHEEYQD GDDGFSLFSY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 1 | 8 | RLRKKKVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 2e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG016050.28 |