PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG015220.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 235aa MW: 27237.4 Da PI: 8.6387 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.5e-05 | 30 | 52 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L Hi+ H TRIDC3BG015220.3 30 SCSVCSRVYPTSRLLSIHISEaH 52 6******************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MVCCPIAGCG AHLDCLEDFE DHYSTRHTAS CSVCSRVYPT SRLLSIHISE AHDSFFQAKV 60 ARGFPMYECL VEGCGEKLKT YKSRQQHLVD KHQFPNSFEF FKRAQPSQRH RQKYHRRQTA 120 YKGEETRDTV MDVDGKNPRQ SKSKYRPKQR DHKEPKENEH CHKESKENEH HEKEAKESDM 180 EVEQKIDELS SAVSRLSTAD SVPSSVTFGH RRSRGLTFVP RSIRQNKQVS QPEAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14140.1 | 7e-72 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG015220.3 |