PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG005370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 28270.1 Da PI: 7.9833 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.1 | 3.5e-17 | 31 | 78 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll +++ +G g+W++ ar+ g++Rt+k+c++rw++yl TRIDC3BG005370.1 31 RGPWTLEEDNLLMSYIACHGEGRWNLLARCSGLKRTGKSCRLRWLNYL 78 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.4 | 2.5e-16 | 84 | 127 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++ ++++++++G++ W++Ia++++ gRt++++k++w++ TRIDC3BG005370.1 84 RGNLTAEEQLVILELHAKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 127 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MSRRKGAAAA GGGAGPMAMA AMEEEAAELR RGPWTLEEDN LLMSYIACHG EGRWNLLARC 60 SGLKRTGKSC RLRWLNYLKP DIKRGNLTAE EQLVILELHA KWGNRWSRIA QHLPGRTDNE 120 IKNYWRTRVQ KQARQLKVDA NSAVFREAVR CYWMPRLLDK MSMAAASTAA PPPLMEQHGQ 180 GVLSSSQSPP IGSDQLCCYG PAAAGFDPSP SASTSGSTAA AALQPAPVPC FSELNWEDQY 240 CYPSGGDLDG GAGGMELDSA A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 1e-74 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG005370.1 |