PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG000230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 228aa MW: 25253.6 Da PI: 8.7843 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.8 | 4.3e-19 | 84 | 138 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq+ Le +F++++++s+++++ LA++l+L rqV vWFqNrRa+ k TRIDC3BG000230.1 84 RKKLRLTKEQTALLEGHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTK 138 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 118.5 | 3.6e-38 | 84 | 172 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq +lLE +F+e+++L++++K++lar+L l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++++l++en+rL++e ++Lr + TRIDC3BG000230.1 84 RKKLRLTKEQTALLEGHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTKENRRLHRELQHLR-A 172 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence |
MFMAQEEAGL ALGLSLGLGA GHHHHHLLQQ KEAAPLEPCL SLSLAGAGAV KREEEEDEER 60 ALIYCSSAAD DHIEGYNSSS GGSRKKLRLT KEQTALLEGH FKEQSTLSHK QKASLARQLS 120 LRPRQVEVWF QNRRARTKLK QTEVDCELLK RCCETLTKEN RRLHRELQHL RALHHHQHHH 180 HHPAAAFFIP SAATAASVCP SCPGAPPAHA ADRPATKRSF FATKSAAC |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 83 | 89 | SRKKLRL |
2 | 133 | 141 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37790.1 | 8e-42 | HD-ZIP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG000230.1 |