PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG066490.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 202aa    MW: 21417.8 Da    PI: 4.4622
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG066490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.2e-161054147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg+ + +E+el+v+++ +lG++ W++Ia +++ gRt++++k++w++ 
  TRIDC3AG066490.1 10 RGNISDDEEELIVRLHGLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 54
                      7899******************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
LNYLRPGIKR GNISDDEEEL IVRLHGLLGN RWSLIAGRLP GRTDNEIKNY WNTTLSKRML  60
QSHGAGCSNH PQAKPPLPPQ AGGEVQAPPE GTSSSPIRTK ALRCTNTVLA VAEGFHEQGR  120
AAPEHVAEED QLGDCLSIGS IDLDLEGIEL GFMMSPWSGA DGLGGQHFGA PGTEADDLEE  180
LLGLGGDGDG HGGLGDLELA WL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.12e-38MYB family protein