PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG061490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 164aa MW: 18039.1 Da PI: 9.7524 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.6 | 1.4e-27 | 8 | 57 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rie+ +nrqv fskRr g++KKA+ELS LCda+va+++fs+ gklyeyss TRIDC3AG061490.1 8 RIEDRTNRQVCFSKRRSGLFKKAFELSLLCDADVALLVFSPAGKLYEYSS 57 8***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
RGRVELRRIE DRTNRQVCFS KRRSGLFKKA FELSLLCDAD VALLVFSPAG KLYEYSSSSI 60 EATYDRYQRF AGPGMNVNGG DARNKNDGDP SNIQSRLEDI ASWSLQNNAD DSDATKLEKL 120 EKLLTDALRN TKSKKMLAQL NSGASTSASA QNSNGPRGLE GGRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 3e-31 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG061490.1 |