PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG060020.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 316aa    MW: 34946.6 Da    PI: 9.1387
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG060020.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.61.8e-121640327
                      S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHgp 27
                      +++C+++++tGtCk+G++CkF+H++
  TRIDC3AG060020.3 16 QPECQYYLKTGTCKFGPTCKFHHPR 40
                      799********************96 PP

2zf-CCCH38.71.6e-126286327
                      S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHgp 27
                      +++C ++++tG+CkyG++CkF+H++
  TRIDC3AG060020.3 62 ERECAYYLKTGQCKYGNTCKFNHPE 86
                      799********************96 PP

3zf-CCCH35.12.2e-11209234227
                       -S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                       ++++C ++ +tG Ck+G+ CkF+H++
  TRIDC3AG060020.3 209 DQPECIYYIKTGDCKFGAVCKFHHPR 234
                       689*********************96 PP

4zf-CCCH42.21.3e-13254280127
                       --S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                       +++elC+f++r+G+Ck+G +CkF H++
  TRIDC3AG060020.3 254 PGEELCKFYSRYGICKFGVNCKFDHPM 280
                       689**********************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
IASARMKGEY PERVGQPECQ YYLKTGTCKF GPTCKFHHPR EKAGIAGMVQ LNTLGYPLRP  60
NERECAYYLK TGQCKYGNTC KFNHPEIFNA VASSRGSPIY PPVHNSGSTG PHSYTGTMAS  120
WTYPRGSFIP SPRWQSPSNY TPMIVPQGLV QVPSWNSYPS PGAQQYYGTS RQGEASAGNQ  180
GMQSSYRSSS FPAPQYALQR ENVFPERPDQ PECIYYIKTG DCKFGAVCKF HHPRVRSQPP  240
PDCILSPMGL PLRPGEELCK FYSRYGICKF GVNCKFDHPM AAPMGVYAYG YSASASPNAP  300
MARRLLESPS GSAYAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02830.11e-112C3H family protein