PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG059320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 287aa MW: 31888.6 Da PI: 6.9016 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 7e-16 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+ ++++G g+W+ a+ g++Rt+k+c++rw++yl TRIDC3AG059320.1 19 RGPWTMEEDALLAGHIAKHGEGRWNELASAAGLRRTGKSCRLRWLNYL 66 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E++l+++++ ++G++ W++Iar+m+ gRt++++k++w++ TRIDC3AG059320.1 72 RGDFTPQEQLLILELHFRWGKR-WSRIAREMP-GRTDNEIKNYWRT 115 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
WPAAAATTGG EQEATDLRRG PWTMEEDALL AGHIAKHGEG RWNELASAAG LRRTGKSCRL 60 RWLNYLRPDV RRGDFTPQEQ LLILELHFRW GKRWSRIARE MPGRTDNEIK NYWRTRVQKH 120 AKQLKCDVDS RQFRDVMRHL WMPRLLERIQ AAAAATPAPS LEHAASPVHP LSVAPACRGG 180 IGMCHSPETT TVTTSSTAGS SVSLEVHFPS NQLVLTAGST TNWSGSGSDQ CGSASARSDD 240 MLDGSWSELL ARACDDGADS VVFPHFELGE SSDDKWSLED IWSQHQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 5e-74 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG059320.1 |