PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG058620.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 561aa MW: 63360.3 Da PI: 9.3563

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG058620.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00078	443	465	1	21
EEET..TTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHir 21 y+C+ C++sF +k +L H r TRIDC3AG058620.6 443 YTCTidGCSMSFDTKKELSLHER 465 99*******************98 PP
2	zf-C2H2	13.9	0.00016	468	490	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L +H ++H TRIDC3AG058620.6 468 CPveGCGKKFFTHKYLLQHRKVH 490 9999*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
KFRPVVLEVL MILILGSESI IDLFVMVCTE YLKIEAEARS LAAEMEVEHG WKDIHFREAN 60 MEDRKMIEEL LQDEESIPTS SDWAVKLGTN LYYSANLAKS PLHNKQIPYN RVIYRAFGCS 120 SPDNSPVKRE NCEGSQDRQK KVVLAGRWCG KAWMSNQVHP FLAQRIESSE AKEADKSSGV 180 QASKRNSGTI TDVPKSSKKR GNMAVEVTID TKRPRLAEGH SSKPLKGIAD VSHPSPAAVV 240 PRVSSRIADR ANRLKSDMTE EDDGHACRPK PKATSHSRTR PPKKIEVEAK KQMNMSKGDS 300 KMMAPTAAKD DEEHPSATKG GPSVGPATKL EFSQRKHRTR TKTMKLLKKA TGEERTPRDH 360 PMHVEGYTCS IEGCSMSFDT RNELSLHELD ICPVKGCGKK FFTHKFLLQH HKVHTETTKQ 420 LKKATGEERA PTPRDHPMRV EGYTCTIDGC SMSFDTKKEL SLHERDICPV EGCGKKFFTH 480 KYLLQHRKVH TDDRPLKCPW EGCDVAFKWA WARTEHLRVH TGDRPYVCCE PGCAETFRFV 540 SDSSRHKRET GHSTKQTKTK T

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

KFRPVVLEVL MILILGSESI IDLFVMVCTE YLKIEAEARS LAAEMEVEHG WKDIHFREAN  60
MEDRKMIEEL LQDEESIPTS SDWAVKLGTN LYYSANLAKS PLHNKQIPYN RVIYRAFGCS  120
SPDNSPVKRE NCEGSQDRQK KVVLAGRWCG KAWMSNQVHP FLAQRIESSE AKEADKSSGV  180
QASKRNSGTI TDVPKSSKKR GNMAVEVTID TKRPRLAEGH SSKPLKGIAD VSHPSPAAVV  240
PRVSSRIADR ANRLKSDMTE EDDGHACRPK PKATSHSRTR PPKKIEVEAK KQMNMSKGDS  300
KMMAPTAAKD DEEHPSATKG GPSVGPATKL EFSQRKHRTR TKTMKLLKKA TGEERTPRDH  360
PMHVEGYTCS IEGCSMSFDT RNELSLHELD ICPVKGCGKK FFTHKFLLQH HKVHTETTKQ  420
LKKATGEERA PTPRDHPMRV EGYTCTIDGC SMSFDTKKEL SLHERDICPV EGCGKKFFTH  480
KYLLQHRKVH TDDRPLKCPW EGCDVAFKWA WARTEHLRVH TGDRPYVCCE PGCAETFRFV  540
SDSSRHKRET GHSTKQTKTK T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	2e-57	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG058620.6