PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG058620.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1015aa MW: 112201 Da PI: 8.7473

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG058620.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0016	897	919	1	21
EEET..TTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHir 21 y+C+ C++sF +k +L H r TRIDC3AG058620.4 897 YTCTidGCSMSFDTKKELSLHER 919 99*******************98 PP
2	zf-C2H2	13	0.00032	922	944	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L +H ++H TRIDC3AG058620.4 922 CPveGCGKKFFTHKYLLQHRKVH 944 9999*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1015 aa Download sequence
HGYAGEVNAL EAFATLGQKT TLLSPELLVG SGVPCCRLVQ NAGEFVVTFP GSYHCGFSHG 60 FNCGEASNIA TPEWWRVAKE AAVRRASINQ PPMLSHYQLL YELALSMCIR DPSIGTMEPR 120 SSRLKEKKKG EGGQLVKKLF VQNAIQDNEL LSCLLNDGSS CIILPINAHD GPVLSALRSR 180 SQLIPKSKLS RCTHDSHNAE GDKEDVISAA GLLDQGLLSC VSCGILSFSC VAVIKPRECA 240 SKYFMSSDYN SINDQLVGSG GSHLANAAGS EGTNGGILRP SFEPYANDAG PVTRNSAPDL 300 LASAYGNQPD TDEDNRNKKI KVSHDSSELD GTKILSSSIK WQQRPSSQSS RCIGGSGISN 360 GPRGVRTRNK YQLKMALSQG FQLKNNYWTM EQKVQPEPSR SKETVKEPLD ASGADNDARC 420 NSAAISVGDP RISTTTMDNL NKPIVKIDKD SSRMHVFCLE HAVEVEKQLQ AIGGAHVILL 480 CRPEYLKIEA EARSLAAEME VEHGWKDIHF REANMEDRKM IEELLQDEES IPTSSDWAVK 540 LGTNLYYSAN LAKSPLHNKQ IPYNRVIYRA FGCSSPDNSP VKRENCEGSQ DRQKKVVLAG 600 RWCGKAWMSN QVHPFLAQRI ESSEAKEADK SSGVQASKRN SGTITDVPKS SKKRGNMAVE 660 VTIDTKRPRL AEGHSSKPLK GIADVSHPSP AAVVPRVSSR IADRANRLKS DMTEEDDGHA 720 CRPKPKATSH SRTRPPKKIE VEAKKQMNMS KGDSKMMAPT AAKDDEEHPS ATKGGPSVGP 780 ATKLEFSQRK HRTRTKTMKL LKKATGEERT PRDHPMHVEG YTCSIEGCSM SFDTRNELSL 840 HELDICPVKG CGKKFFTHKF LLQHHKVHTE TTKQLKKATG EERAPTPRDH PMRVEGYTCT 900 IDGCSMSFDT KKELSLHERD ICPVEGCGKK FFTHKYLLQH RKVHTDDRPL KCPWEGCDVA 960 FKWAWARTEH LRVHTGDRPY VCCEPGCAET FRFVSDSSRH KRETGHSTKQ TKTKT

Sequence ? help Back to Top

Protein Sequence Length: 1015 aa Download sequence

HGYAGEVNAL EAFATLGQKT TLLSPELLVG SGVPCCRLVQ NAGEFVVTFP GSYHCGFSHG  60
FNCGEASNIA TPEWWRVAKE AAVRRASINQ PPMLSHYQLL YELALSMCIR DPSIGTMEPR  120
SSRLKEKKKG EGGQLVKKLF VQNAIQDNEL LSCLLNDGSS CIILPINAHD GPVLSALRSR  180
SQLIPKSKLS RCTHDSHNAE GDKEDVISAA GLLDQGLLSC VSCGILSFSC VAVIKPRECA  240
SKYFMSSDYN SINDQLVGSG GSHLANAAGS EGTNGGILRP SFEPYANDAG PVTRNSAPDL  300
LASAYGNQPD TDEDNRNKKI KVSHDSSELD GTKILSSSIK WQQRPSSQSS RCIGGSGISN  360
GPRGVRTRNK YQLKMALSQG FQLKNNYWTM EQKVQPEPSR SKETVKEPLD ASGADNDARC  420
NSAAISVGDP RISTTTMDNL NKPIVKIDKD SSRMHVFCLE HAVEVEKQLQ AIGGAHVILL  480
CRPEYLKIEA EARSLAAEME VEHGWKDIHF REANMEDRKM IEELLQDEES IPTSSDWAVK  540
LGTNLYYSAN LAKSPLHNKQ IPYNRVIYRA FGCSSPDNSP VKRENCEGSQ DRQKKVVLAG  600
RWCGKAWMSN QVHPFLAQRI ESSEAKEADK SSGVQASKRN SGTITDVPKS SKKRGNMAVE  660
VTIDTKRPRL AEGHSSKPLK GIADVSHPSP AAVVPRVSSR IADRANRLKS DMTEEDDGHA  720
CRPKPKATSH SRTRPPKKIE VEAKKQMNMS KGDSKMMAPT AAKDDEEHPS ATKGGPSVGP  780
ATKLEFSQRK HRTRTKTMKL LKKATGEERT PRDHPMHVEG YTCSIEGCSM SFDTRNELSL  840
HELDICPVKG CGKKFFTHKF LLQHHKVHTE TTKQLKKATG EERAPTPRDH PMRVEGYTCT  900
IDGCSMSFDT KKELSLHERD ICPVEGCGKK FFTHKYLLQH RKVHTDDRPL KCPWEGCDVA  960
FKWAWARTEH LRVHTGDRPY VCCEPGCAET FRFVSDSSRH KRETGHSTKQ TKTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	1e-73	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG058620.4