PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG055030.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 130aa    MW: 14192.2 Da    PI: 10.0893
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG055030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33.2e-1756103148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+WT+eEd++l+ ++k +G g+W++ ++  g+ R++k+c++rw +yl
  TRIDC3AG055030.1  56 KGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYL 103
                       79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
HPAPPPPLPA AYSRERASSS SEPPPSSTRK GSRVAIASAG AGMGRSPCCE KAHTNKGAWT  60
KEEDQRLIGY IKAHGEGCWR SLPKAAGLLR CGKSCRLRWM NYLRPDLKRG NFTDDDDELI  120
IKLHALLGNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-58MYB family protein