PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG054510.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ERF

Protein Properties

Length: 359aa MW: 39083.6 Da PI: 12.1225

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG054510.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	61.1	2.5e-19	134	183	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a++ a+++++g TRIDC3AG054510.4 134 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDDAALRFRG 183 7******.******7.....337**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
DNGEPGGPHV GLLPGAGDVD DGVGAVAGRG GGRPVGAVRL RRRGGGVGLG GAAGNARRRW 60 RRRLRARAWE LPVFRVRSFY HRTTLFLFKH PPPEEDPASL SESTLRHIRS YMTMEEHRSR 120 SPASSNVAEA PRRRYRGVRQ RPWGKWAAEI RDPHKAARVW LGTFETAEAA ARAYDDAALR 180 FRGSRAKLNF PEDARLHPAT VTPAAAPARA PIAAQSASTP AMYAGSTQAS DYLRYQMLLQ 240 GRGAAAANQE QLLWRRCHEQ LLWRRRRRRR HHERFPGVLL LVPVLLRLGG HGAVLLLRVL 300 RSGPPLLVAA RPAAAPAAAG RRGGGVELGE RAGAGPWHDD GGLLVRLEPA AVPPAAHPI

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

DNGEPGGPHV GLLPGAGDVD DGVGAVAGRG GGRPVGAVRL RRRGGGVGLG GAAGNARRRW  60
RRRLRARAWE LPVFRVRSFY HRTTLFLFKH PPPEEDPASL SESTLRHIRS YMTMEEHRSR  120
SPASSNVAEA PRRRYRGVRQ RPWGKWAAEI RDPHKAARVW LGTFETAEAA ARAYDDAALR  180
FRGSRAKLNF PEDARLHPAT VTPAAAPARA PIAAQSASTP AMYAGSTQAS DYLRYQMLLQ  240
GRGAAAANQE QLLWRRCHEQ LLWRRRRRRR HHERFPGVLL LVPVLLRLGG HGAVLLLRVL  300
RSGPPLLVAA RPAAAPAAAG RRGGGVELGE RAGAGPWHDD GGLLVRLEPA AVPPAAHPI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	67	RRRWRRRLRAR
2	255	267	RRCHEQLLWRRRR
3	264	269	RRRRRR
4	264	270	RRRRRRR
5	265	270	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	4e-14	ERF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG054510.4