PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG054510.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 266aa    MW: 27684 Da    PI: 9.1356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG054510.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-192574255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a++ a+++++g
  TRIDC3AG054510.2 25 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDDAALRFRG 74
                      7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
SSDTMEEHRS RSPASSNVAE APRRRYRGVR QRPWGKWAAE IRDPHKAARV WLGTFETAEA  60
AARAYDDAAL RFRGSRAKLN FPEDARLHPA TVTPAAAPAR APIAAQSAST PAMYAGSTQA  120
SDYLRYQMLL QGRGAAAANQ GNLLSFYGGG GGGGGAMSSS YGGGVMSSSY GGGGGGGGTM  180
SGFLGSYYSF PSSSVSVATV PSSSSASSAP GHHYSSPHDP QQHQQQQGDA AAEWSWESAL  240
APDPGTTTAA SWSDSSQQPY HPPHTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.13e-15ERF family protein