PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG053800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 26659.6 Da PI: 10.0897 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.1 | 4e-08 | 70 | 116 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 r +W +eEd+ + a l+ + +W+++a++++ gRt+ + +++q TRIDC3AG053800.1 70 RRPWAKEEDKAFEAALVTLPDHapdRWERVAARLP-GRTPQEAWEHYQ 116 679*****************99*************.****98777777 PP | |||||||
2 | Myb_DNA-binding | 45.1 | 2.4e-14 | 169 | 213 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE++l++d+ +++G g+W+ I+r Rt+ q+ s+ qky TRIDC3AG053800.1 169 PWSEEEHKLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 213 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
TNRTKQPHGA AQPVHEHTQR HPRPARQLIG AAPRTWRLGV VSSPQGGGPE RRRGEEAMDL 60 YYQQAAPAAR RPWAKEEDKA FEAALVTLPD HAPDRWERVA ARLPGRTPQE AWEHYQALVA 120 DVDLIERGAV DTPDCWDFDD DGDGRATVAS SRGRPAGKAR GEERRRGIPW SEEEHKLFLD 180 GLEKYGRGDW RNISRFAVRS RTPTQVASHA QKYFIRQANA ATRDSKRKSI HDITTP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 6e-42 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG053800.1 |