PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG050850.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 353aa    MW: 40327.8 Da    PI: 4.4544
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG050850.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.76.4e-067598226
                      -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                      k  lC ff   G+C+ G +CkF+H+
  TRIDC3AG050850.4 75 KSILCEFFKV-GQCQKGFKCKFSHD 98
                      6779**9999.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
PTKTAAKAWG NTQIEAVNTL IRLLCSSNLL FFLFVDVDAD AQKKKEEEKA REKELNDLFK  60
VAVSQPKVPV GVDPKSILCE FFKVGQCQKG FKCKFSHDLN VQRKGEKIDI YSDKRDGEEE  120
DTMDDWDQET LEKVIASKNA EYQQNKPTDI VCKHFLDAVE KKQYGWFWVC PNGGKECRYR  180
HALPPGYVLK SQMKALLEEE SKKVAIEDEI EDQRRKVQTT TPMTTELFME WKRRKAEEKE  240
AGLAALRADR AKNDRMSGRE LFMADASVFI DDAEAYEVYE RREEPQANQE QGKKSQDEGP  300
SSSTSNGKEA DEEPDDEDLD DDDDLDLDEL NELEASLSRT NIQIREPGEG TSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214235RRKVQTTTPMTTELFMEWKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.11e-126C3H family protein