PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG050850.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 351aa    MW: 40181.1 Da    PI: 4.4278
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG050850.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.76.3e-067295226
                      -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                      k  lC ff   G+C+ G +CkF+H+
  TRIDC3AG050850.3 72 KSILCEFFKV-GQCQKGFKCKFSHD 95
                      6779**9999.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
GQDLRAQEQE QEQERPEVRP VAAPVRPAQA RPDQDRRQEE EGGGEGAREG AQRSVQGRRQ  60
PAQGPRWCVD PKSILCEFFK VGQCQKGFKC KFSHDLNVQR KGEKIDIYSD KRDGEEEDTM  120
DDWDQETLEK VIASKNAEYQ QNKPTDIVVC KHFLDAVEKK QYGWFWVCPN GGKECRYRHA  180
LPPGYVLKSQ MKALLEEESK KVAIEDEIED QRRKVQTTTP MTTELFMEWK RRKAEEKEAG  240
LAALRADRAK NDRMSGRELF MADASVFIDD AEAYEVYERR EEPQANQEQG KKSQDEGPSS  300
STSNGKEADE EPDDEDLDDD DDLDLDELNE LEASLSRTNI QIREPGEGTS S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212233RRKVQTTTPMTTELFMEWKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.11e-111C3H family protein