PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG050070.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 562aa MW: 59788.9 Da PI: 6.5197

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG050070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.8	2e-32	220	276	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkve+s +++++ei+Y+g+Hnh TRIDC3AG050070.1 220 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVETSL-EGQITEIVYKGTHNHA 276 8**************************************.*************7 PP
2	WRKY	104.9	4.4e-33	383	441	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ TRIDC3AG050070.1 383 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDLRAVITTYEGKHNHD 441 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MTTSSSGSVE TSTNSRPGSF SFGSASFTEM LGGSAAAGGA SGYKALTPPS LPLSPSLMSP 60 SSFFSMPAGM NLADFLDSPV LLTSSVIPSP TTGAFGSQFN WQPEAPTPSA AEQGGKEEQR 120 QPYSDFSFQT APANGEEAAR ATTTTTSLQP PVAVASQGEE AYTGQQPQQQ AWGYGQQQEG 180 MDASGANPAS FGAPALQATS SEMAPAGAYR QTHSQRRSSD DGYNWRKYGQ KQVKGSENPR 240 SYYKCTFPNC PTKKKVETSL EGQITEIVYK GTHNHAKPLN TRRGSGGGAA AAQVLQSGGD 300 ASENSFGGMV TTPENSSASF GDDENGVSSP RSGNVGRNDN DDDEPDSKRR RDGGDGEGMN 360 MAGNRTVREP RVVVQTMSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT TVGCPVRKHV 420 ERASHDLRAV ITTYEGKHNH DVPAARGSAA LYRPAPRAAD STASTGHYLN PQPSAMAYQA 480 NAAPAVAGTQ QYAPRPNGFS GQNQGSFGFN GSFGFSGPGF DNPTASYMSQ HQQQQRQNDA 540 MHASSAKEEP REEDMFFQNS QY

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MTTSSSGSVE TSTNSRPGSF SFGSASFTEM LGGSAAAGGA SGYKALTPPS LPLSPSLMSP  60
SSFFSMPAGM NLADFLDSPV LLTSSVIPSP TTGAFGSQFN WQPEAPTPSA AEQGGKEEQR  120
QPYSDFSFQT APANGEEAAR ATTTTTSLQP PVAVASQGEE AYTGQQPQQQ AWGYGQQQEG  180
MDASGANPAS FGAPALQATS SEMAPAGAYR QTHSQRRSSD DGYNWRKYGQ KQVKGSENPR  240
SYYKCTFPNC PTKKKVETSL EGQITEIVYK GTHNHAKPLN TRRGSGGGAA AAQVLQSGGD  300
ASENSFGGMV TTPENSSASF GDDENGVSSP RSGNVGRNDN DDDEPDSKRR RDGGDGEGMN  360
MAGNRTVREP RVVVQTMSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT TVGCPVRKHV  420
ERASHDLRAV ITTYEGKHNH DVPAARGSAA LYRPAPRAAD STASTGHYLN PQPSAMAYQA  480
NAAPAVAGTQ QYAPRPNGFS GQNQGSFGFN GSFGFSGPGF DNPTASYMSQ HQQQQRQNDA  540
MHASSAKEEP REEDMFFQNS QY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	4e-98	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG050070.1