PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG049900.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 99aa MW: 11177.9 Da PI: 7.5587 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 112.1 | 3.8e-35 | 1 | 90 | 11 | 100 |
DUF260 11 kCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +Ca++C++apyf ++p+kfa+vhk+FGasnv+k+l ++pe er da+sslvyeA+ r+rdPvyG++g i+ lqqq++ l+ael+++++e TRIDC3AG049900.2 1 RCAHECPFAPYFSPHEPHKFAAVHKVFGASNVSKMLLEVPEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELQAVRAE 90 6************************************************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
RCAHECPFAP YFSPHEPHKF AAVHKVFGAS NVSKMLLEVP EAERADAASS LVYEANLRLR 60 DPVYGCMGAI SMLQQQVNAL EAELQAVRAE IFKHRYRMM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30340.1 | 9e-55 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG049900.2 |