PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG049900.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 146aa MW: 15231.9 Da PI: 4.258 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 54.7 | 2.9e-17 | 1 | 56 | 45 | 100 |
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +l ++pe er da+sslvyeA+ r+rdPvyG++g i+ lqqq++ l+ael+++++e TRIDC3AG049900.1 1 MLLEVPEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELQAVRAE 56 57789**********************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MLLEVPEAER ADAASSLVYE ANLRLRDPVY GCMGAISMLQ QQVNALEAEL QAVRAEIFKH 60 RYRQAGVGVG AAHLIVDDDV SAAAAGGFRA PATSLVHTAD VVSVAEAGQE VATMPSTATA 120 TAYAAGQPSS TDYSSLDTSE HDAYFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30340.1 | 1e-27 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG049900.1 |