PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043150.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 708aa MW: 76148.5 Da PI: 8.5533

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043150.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.2	9e-25	182	283	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++ s++l+ +d++g +W++++iyr++++r++lt+GW++Fv+ ++L +gD v+F + TRIDC3AG043150.3 182 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyQQVR-PSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFL--RG 271 99**************************975554.4569********************************************..34 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++el+++v+r+ TRIDC3AG043150.3 272 DDGELRLGVRRA 283 89999*9986 PP
2	Auxin_resp	110.9	1.3e-36	308	389	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +a++++++svF+++YnPra++seF+v+++k++k+l++++++GmRfk+++ +ed++err sG+++g++++dp+rW++SkW+sL+ TRIDC3AG043150.3 308 VANSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR-SGIITGINEVDPIRWTGSKWKSLQ 389 68999***************************************************.9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
WLQSDALGGI NGALPLLRIP LLPHPPRGRA RLIRPPAFNR APSFPDGTAG LRAGAMGIDL 60 NAAGEPGKAA AVSVCRDLWH ACAGPVVALP RRGSAVVYLP QAHLAGAGGG GDVPVALPPH 120 VACRVVDVEL CADPATDEVY ARLAMVAEGE VFEKNMRGGR FEGEDDMEDG DGERKSRMLH 180 MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYQQVRPSQ ELVAKDLHGA KWRFRHIYRG 240 QPRRHLLTTG WSSFVNKKKL VSGDAVLFLR GDDGELRLGV RRAIQLKNEA LLKSFNSNSS 300 KIHTLSAVAN SLKHRSVFHI CYNPRAAASE FIVPYWKFLK SLNRPFCIGM RFKIQYGSED 360 VNERRSGIIT GINEVDPIRW TGSKWKSLQV RWEDGTDCNS QNRLSPWDIE IVGGSVSIAQ 420 SLSASSSKRT KLCPQGNVDV PTLYGNGRPD SVGADKLPRV LQGQELMGSG THRVTCPPRP 480 GGATEFRRSD GTGFLADTRS CMLSGPASRL PPQSPYFAYQ PVGFGESVGF PEVLQGQEVC 540 QTVPLFQGMV SDTCSAKGGY GLYNYMCTSS AMNGGFSSAA QGYPLSLSTP PPAEVASPSS 600 TVAAPQLWLA SKNNEEAAIG SQPNPLGTRK ASGDGAAKLG SDGRKVARTS CMLFGFSLTE 660 KMLPTEEDCA KEGNHEVDCQ NPRMLDLFGY NRATPGALHA LCAAPLGI

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

WLQSDALGGI NGALPLLRIP LLPHPPRGRA RLIRPPAFNR APSFPDGTAG LRAGAMGIDL  60
NAAGEPGKAA AVSVCRDLWH ACAGPVVALP RRGSAVVYLP QAHLAGAGGG GDVPVALPPH  120
VACRVVDVEL CADPATDEVY ARLAMVAEGE VFEKNMRGGR FEGEDDMEDG DGERKSRMLH  180
MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYQQVRPSQ ELVAKDLHGA KWRFRHIYRG  240
QPRRHLLTTG WSSFVNKKKL VSGDAVLFLR GDDGELRLGV RRAIQLKNEA LLKSFNSNSS  300
KIHTLSAVAN SLKHRSVFHI CYNPRAAASE FIVPYWKFLK SLNRPFCIGM RFKIQYGSED  360
VNERRSGIIT GINEVDPIRW TGSKWKSLQV RWEDGTDCNS QNRLSPWDIE IVGGSVSIAQ  420
SLSASSSKRT KLCPQGNVDV PTLYGNGRPD SVGADKLPRV LQGQELMGSG THRVTCPPRP  480
GGATEFRRSD GTGFLADTRS CMLSGPASRL PPQSPYFAYQ PVGFGESVGF PEVLQGQEVC  540
QTVPLFQGMV SDTCSAKGGY GLYNYMCTSS AMNGGFSSAA QGYPLSLSTP PPAEVASPSS  600
TVAAPQLWLA SKNNEEAAIG SQPNPLGTRK ASGDGAAKLG SDGRKVARTS CMLFGFSLTE  660
KMLPTEEDCA KEGNHEVDCQ NPRMLDLFGY NRATPGALHA LCAAPLGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-147	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043150.3