PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG040030.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 162aa    MW: 18903.8 Da    PI: 10.6325
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG040030.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP46.46.7e-159413871
           E2F_TDP 38 dvknkrRRiYDilNVLealnliekkekneirwkg 71
                      d+kn+rRR+YD++NVL al++i+k ek+eirw+g
  TRIDC3AG040030.5  9 DEKNIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 41
                      789*********************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MAHIGQGFDE KNIRRRVYDA FNVLIALRVI AKEKKEIRWM GLSNYRYEKI KKLEEVRKEL  60
VNKIRNKKAL LQEIEKQFDD LQNIKLRNQT LESSAQNVNG IRLPFVLVKT SRKARVEIEI  120
SDDSKFAHFE FNGAPFTLHD DLSILEGVRR NSIGRAGRAT LH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.22e-42E2F/DP family protein