PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG039530.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 300aa MW: 32213.3 Da PI: 8.0249 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.1 | 1.1e-14 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEdell +v+ +G +W + +++ g++R++k+c++rw++yl TRIDC3AG039530.3 14 RGPWAPEEDELLRSYVRSHGAVgNWIALPQKAGLNRCGKSCRLRWLNYL 62 89******************879************************97 PP | |||||||
2 | Myb_DNA-binding | 34.3 | 5.5e-11 | 71 | 111 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 T++Ed + + + G++ W+ Ia++++ gRt++++k++w++ TRIDC3AG039530.3 71 YTEQEDMVICSLYNSIGSR-WSIIASKLP-GRTDNDVKNYWNT 111 69*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MGRAPCCDKA SVKRGPWAPE EDELLRSYVR SHGAVGNWIA LPQKAGLNRC GKSCRLRWLN 60 YLRPDIKHGG YTEQEDMVIC SLYNSIGSRW SIIASKLPGR TDNDVKNYWN TKLKKKAMAM 120 HQQQQYHHHH GTAARGHARG ATIATPPPAP QSQCASYMQP SPASASSAVT TASGDAASFG 180 AMYSPSHQAA PLAHYNVNAA APLAEFPAMP TPAAANSWAI NMAFEDMFLP ELVGGGDFSQ 240 ADLFGGFGAL LLQAQDSRAQ SSLQELSACY FPNAQAEMWA ADADHVNVKP PGAGLCPSLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-67 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG039530.3 |