PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG036870.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 670aa MW: 73874.1 Da PI: 7.0836

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG036870.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.3	7.1e-24	134	235	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + TRIDC3AG036870.5 134 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyNLQRP-SQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RG 223 99**************************9966654.569**********************************************..34 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++ l ++v+r+ TRIDC3AG036870.5 224 EDGVLQLGVRRA 235 889899999986 PP
2	Auxin_resp	94.9	1.3e-31	260	344	1	82
Auxin_resp 1 aahaastksvFevvYnPra....stseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +aha+++ks+F+++YnP++ ++seF+v+++k+++++++++svGmRfkm++e+ed+serr +G+++g +++d + ++SkW++L TRIDC3AG036870.5 260 VAHAVAMKSIFHIYYNPSSqvqlCESEFIVPYWKFMRSFSQPFSVGMRFKMKYENEDASERRSTGMITGSRESDL-KSHGSKWKCL 344 79*************86233369*******************************************776.*******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MIGIDLNTVE DEEEGGPSAE PPRGTVCLEL WHACAGPVGP LPRKGSAVVY LPEGHLEHTR 60 EAVAAVPPHV FCRVVDVNLQ ADPATDEVYA QVSLLVDNEE AKRRMRQGES EEACDGDGED 120 TGAAKRRARM PHMFCKTLTA SDTSTHGGFS VPRRAAEDCF PPLDYNLQRP SQELVAKDLH 180 GTEWRFRHIY RGQPRRHLLT TGWSAFVNKK KLVSGDAVLF LRGEDGVLQL GVRRAAQLKN 240 VSPFPALFNQ DSSLRSLGNV AHAVAMKSIF HIYYNPSSQV QLCESEFIVP YWKFMRSFSQ 300 PFSVGMRFKM KYENEDASER RSTGMITGSR ESDLKSHGSK WKCLVVRWDD DVECRRPNRV 360 SPWEIELAGS VSGSHLSSPH SKRLKPCLPQ VNPDMLLPSG SVSSDFAESA RFHKVLQGQE 420 LLGSKAHDGT VNSASEASQA SEARNFQYSD DRNCSINMCN IPGVPGLGAR TPPENHGFSY 480 HCSGFGESQR FQKVLQGQEV FGPYEGGTLS DAVIRGSSFC QPDGNYTSRA TYKWLMSQGC 540 DYRGPVTPAM PQASSPLSVL MFPQTSSKIH GFEYVCRSLD KDDNIRHVTI NATQDMGRTS 600 HTLPLWPRLV SGKAVASCAG TKKLPSIGSA EHEPNDKDVH TNGCKIFGIS LTQKVRVCDE 660 VECSSANCDF

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MIGIDLNTVE DEEEGGPSAE PPRGTVCLEL WHACAGPVGP LPRKGSAVVY LPEGHLEHTR  60
EAVAAVPPHV FCRVVDVNLQ ADPATDEVYA QVSLLVDNEE AKRRMRQGES EEACDGDGED  120
TGAAKRRARM PHMFCKTLTA SDTSTHGGFS VPRRAAEDCF PPLDYNLQRP SQELVAKDLH  180
GTEWRFRHIY RGQPRRHLLT TGWSAFVNKK KLVSGDAVLF LRGEDGVLQL GVRRAAQLKN  240
VSPFPALFNQ DSSLRSLGNV AHAVAMKSIF HIYYNPSSQV QLCESEFIVP YWKFMRSFSQ  300
PFSVGMRFKM KYENEDASER RSTGMITGSR ESDLKSHGSK WKCLVVRWDD DVECRRPNRV  360
SPWEIELAGS VSGSHLSSPH SKRLKPCLPQ VNPDMLLPSG SVSSDFAESA RFHKVLQGQE  420
LLGSKAHDGT VNSASEASQA SEARNFQYSD DRNCSINMCN IPGVPGLGAR TPPENHGFSY  480
HCSGFGESQR FQKVLQGQEV FGPYEGGTLS DAVIRGSSFC QPDGNYTSRA TYKWLMSQGC  540
DYRGPVTPAM PQASSPLSVL MFPQTSSKIH GFEYVCRSLD KDDNIRHVTI NATQDMGRTS  600
HTLPLWPRLV SGKAVASCAG TKKLPSIGSA EHEPNDKDVH TNGCKIFGIS LTQKVRVCDE  660
VECSSANCDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-157	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG036870.5