PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG036870.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 471aa    MW: 52603.3 Da    PI: 8.7593
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG036870.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.14e-245106199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + 
  TRIDC3AG036870.4   5 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyNLQRP-SQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RG 94 
                       99****************************9966654.569************************************************..34 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       +++ l ++v+r+
  TRIDC3AG036870.4  95 EDGVLQLGVRRA 106
                       889899999986 PP
2Auxin_resp106.23.7e-35131211182
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                       +aha+++ks+F+++YnPr ++seF+v+++k+++++++++svGmRfkm++e+ed+serr +G+++g +++d  + ++SkW++L
  TRIDC3AG036870.4 131 VAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFKMKYENEDASERRSTGMITGSRESDL-KSHGSKWKCL 211
                       79******************************************************************776.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MPHMFCKTLT ASDTSTHGGF SVPRRAAEDC FPPLDYNLQR PSQELVAKDL HGTEWRFRHI  60
YRGQPRRHLL TTGWSAFVNK KKLVSGDAVL FLRGEDGVLQ LGVRRAAQLK NVSPFPALFN  120
QDSSLRSLGN VAHAVAMKSI FHIYYNPRLC ESEFIVPYWK FMRSFSQPFS VGMRFKMKYE  180
NEDASERRST GMITGSRESD LKSHGSKWKC LVVRWDDDVE CRRPNRVSPW EIELAGSVSG  240
SHLSSPHSKR LKPCLPQVNP DMLLPSGSVS SDFAESARFH KVLQGQELLG SKAHDGTVNS  300
ASEASQASEA RNFQYSDDRN CSINMCNIPG VPGLGARTPP ENHGFSYHCS GFGESQRFQK  360
VLQGQEVFGP YEGGTLSDAV IRGSSFCQPD GNYTSRATYK WLMSQGCDYR GPVTPAMPQA  420
SSPLSVLMFP QTSSKIHGFE YVCRSLDKDD NIRHVTINAT QDMGRTSHTL P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-118ARF family protein