PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG036870.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 498aa MW: 55580.5 Da PI: 8.4781

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG036870.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.9	4.4e-24	30	131	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + TRIDC3AG036870.3 30 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyNLQRP-SQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RG 119 99**************************9966654.569**********************************************..34 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++ l ++v+r+ TRIDC3AG036870.3 120 EDGVLQLGVRRA 131 889899999986 PP
2	Auxin_resp	106.1	4.1e-35	156	236	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +aha+++ks+F+++YnPr ++seF+v+++k+++++++++svGmRfkm++e+ed+serr +G+++g +++d + ++SkW++L TRIDC3AG036870.3 156 VAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFKMKYENEDASERRSTGMITGSRESDL-KSHGSKWKCL 236 79****************************************************************776.*******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MRQGESEEAC DGDGEDTGAA KRRARMPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD 60 YNLQRPSQEL VAKDLHGTEW RFRHIYRGQP RRHLLTTGWS AFVNKKKLVS GDAVLFLRGE 120 DGVLQLGVRR AAQLKNVSPF PALFNQDSSL RSLGNVAHAV AMKSIFHIYY NPRLCESEFI 180 VPYWKFMRSF SQPFSVGMRF KMKYENEDAS ERRSTGMITG SRESDLKSHG SKWKCLVVRW 240 DDDVECRRPN RVSPWEIELA GSVSGSHLSS PHSKRLKPCL PQVNPDMLLP SGSVSSDFAE 300 SARFHKVLQG QELLGSKAHD GTVNSASEAS QASEARNFQY SDDRNCSINM CNIPGVPGLG 360 ARTPPENHGF SYHCSGFGES QRFQKVLQGQ EVFGPYEGGT LSDAVIRGSS FCQPDGNYTS 420 RATYKWLMSQ GCDYRGPVTP AMPQASSPLS VLMFPQTSSK IHGFEYVCRS LDKDDNIRHV 480 TINATQDMGR TSHTLPLW

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MRQGESEEAC DGDGEDTGAA KRRARMPHMF CKTLTASDTS THGGFSVPRR AAEDCFPPLD  60
YNLQRPSQEL VAKDLHGTEW RFRHIYRGQP RRHLLTTGWS AFVNKKKLVS GDAVLFLRGE  120
DGVLQLGVRR AAQLKNVSPF PALFNQDSSL RSLGNVAHAV AMKSIFHIYY NPRLCESEFI  180
VPYWKFMRSF SQPFSVGMRF KMKYENEDAS ERRSTGMITG SRESDLKSHG SKWKCLVVRW  240
DDDVECRRPN RVSPWEIELA GSVSGSHLSS PHSKRLKPCL PQVNPDMLLP SGSVSSDFAE  300
SARFHKVLQG QELLGSKAHD GTVNSASEAS QASEARNFQY SDDRNCSINM CNIPGVPGLG  360
ARTPPENHGF SYHCSGFGES QRFQKVLQGQ EVFGPYEGGT LSDAVIRGSS FCQPDGNYTS  420
RATYKWLMSQ GCDYRGPVTP AMPQASSPLS VLMFPQTSSK IHGFEYVCRS LDKDDNIRHV  480
TINATQDMGR TSHTLPLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-120	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG036870.3