PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG036870.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 343aa    MW: 38787.1 Da    PI: 9.1127
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG036870.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.92.3e-2477178199
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   +
  TRIDC3AG036870.12  77 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyNLQRP-SQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--R 165
                        99****************************9966654.569************************************************..3 PP

                        SSEE..EEEEE-S CS
                 B3  87 rsefelvvkvfrk 99 
                         +++ l ++v+r+
  TRIDC3AG036870.12 166 GEDGVLQLGVRRA 178
                        4899899999986 PP
2Auxin_resp106.92.2e-35203283182
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                        +aha+++ks+F+++YnPr ++seF+v+++k+++++++++svGmRfkm++e+ed+serr +G+++g +++d  + ++SkW++L
  TRIDC3AG036870.12 203 VAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFKMKYENEDASERRSTGMITGSRESDL-KSHGSKWKCL 283
                        79******************************************************************776.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
HTREAVAAVP PHVFCRVVDV NLQADPATDE VYAQVSLLVD NEEAKRRMRQ GESEEACDGD  60
GEDTGAAKRR ARMPHMFCKT LTASDTSTHG GFSVPRRAAE DCFPPLDYNL QRPSQELVAK  120
DLHGTEWRFR HIYRGQPRRH LLTTGWSAFV NKKKLVSGDA VLFLRGEDGV LQLGVRRAAQ  180
LKNVSPFPAL FNQDSSLRSL GNVAHAVAMK SIFHIYYNPR LCESEFIVPY WKFMRSFSQP  240
FSVGMRFKMK YENEDASERR STGMITGSRE SDLKSHGSKW KCLVVRWDDD VECRRPNRVS  300
PWEIELAGSV SGSHLSSPHS KRLKPCLPQV NPDMLLPSRL GCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-133ARF family protein