PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG036870.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 614aa    MW: 68089.6 Da    PI: 7.7618
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG036870.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.56.2e-2482183199
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   +
  TRIDC3AG036870.11  82 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyNLQRP-SQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--R 170
                        99****************************9966654.569************************************************..3 PP

                        SSEE..EEEEE-S CS
                 B3  87 rsefelvvkvfrk 99 
                         +++ l ++v+r+
  TRIDC3AG036870.11 171 GEDGVLQLGVRRA 183
                        4889899999986 PP
2Auxin_resp105.65.6e-35208288182
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                        +aha+++ks+F+++YnPr ++seF+v+++k+++++++++svGmRfkm++e+ed+serr +G+++g +++d  + ++SkW++L
  TRIDC3AG036870.11 208 VAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFKMKYENEDASERRSTGMITGSRESDL-KSHGSKWKCL 288
                        79******************************************************************776.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
EGHLEHTREA VAAVPPHVFC RVVDVNLQAD PATDEVYAQV SLLVDNEEAK RRMRQGESEE  60
ACDGDGEDTG AAKRRARMPH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYNLQRPSQ  120
ELVAKDLHGT EWRFRHIYRG QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR GEDGVLQLGV  180
RRAAQLKNVS PFPALFNQDS SLRSLGNVAH AVAMKSIFHI YYNPRLCESE FIVPYWKFMR  240
SFSQPFSVGM RFKMKYENED ASERRSTGMI TGSRESDLKS HGSKWKCLVV RWDDDVECRR  300
PNRVSPWEIE LAGSVSGSHL SSPHSKRLKP CLPQVNPDML LPSGSVSSDF AESARFHKVL  360
QGQELLGSKA HDGTVNSASE ASQASEARNF QYSDDRNCSI NMCNIPGVPG LGARTPPENH  420
GFSYHCSGFG ESQRFQKVLQ GQEVFGPYEG GTLSDAVIRG SSFCQPDGNY TSRATYKWLM  480
SQGCDYRGPV TPAMPQASSP LSVLMFPQTS SKIHGFEYVC RSLDKDDNIR HVTINATQDM  540
GRTSHTLPLW PRLVSGKAVA SCAGTKKLPS IGSAEHEPND KDVHTNGCKI FGISLTQKVR  600
VCDEVECSSA NCDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-141ARF family protein