PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG034340.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 26285.2 Da PI: 6.6064 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4e-16 | 40 | 87 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++lv ++ +G g+W+ ar g++R +k+c++rw++yl TRIDC3AG034340.2 40 KGPWTLEEDLILVGYISHHGEGSWDNLARSAGLNRNGKSCRLRWLNYL 87 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.6e-16 | 93 | 136 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eEd + +++ +lG++ W+ Ia++++ gRt++++k++w++ TRIDC3AG034340.2 93 RGSISPEEDMVIRELHSRLGNK-WAEIAKHLP-GRTDNEVKNYWRT 136 7888******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
FTEDDTTLGS SVPEREREGE KLTRMARMMC GRAGEPAVRK GPWTLEEDLI LVGYISHHGE 60 GSWDNLARSA GLNRNGKSCR LRWLNYLRPG LRRGSISPEE DMVIRELHSR LGNKWAEIAK 120 HLPGRTDNEV KNYWRTKVHK KAPGHQKQLP ATSEATSSVS ASTSHASSTV GDEYTQTSFP 180 YPDLSWVAAD HHETVDVGAS ATRFFPSEFG GNFWNVQDNF WETLPLSDPV YEAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27810.1 | 7e-56 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG034340.2 |