PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG023400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 223aa MW: 23138.9 Da PI: 9.8914 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 101.9 | 5.8e-32 | 18 | 117 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlka 92 aCa+Ck++rrkC+++C la yfpa+++++f+++h +FG++n++kl+ka +e r++a+++l++eA++r rdP +G+++ ++ l+++ + l+a TRIDC3AG023400.1 18 ACAVCKHQRRKCEPNCELAAYFPANRMNDFRALHLVFGVANLTKLIKANATEAaRRRAAETLTWEARWRERDPSEGCYREVSCLRRENAVLRA 110 7**********************************************9977766*************************************** PP DUF260 93 elallke 99 e a+l++ TRIDC3AG023400.1 111 ENAALRR 117 9998775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MTGGVNGNGG GGGGNGGACA VCKHQRRKCE PNCELAAYFP ANRMNDFRAL HLVFGVANLT 60 KLIKANATEA ARRRAAETLT WEARWRERDP SEGCYREVSC LRRENAVLRA ENAALRRRAN 120 QCACCATTLQ QQQQQQILLV SAYNNGARPP GGVLHGASAG VVPGGFYSGN AGAVRAANGN 180 GAMPARPHVS APAPQTTMAG YAQGDRHHAA SGGANGTGAA GQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 1e-15 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG023400.1 |