PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG017110.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 27405.3 Da PI: 4.8838 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.7e-18 | 67 | 117 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++aa+++++g TRIDC3AG017110.3 67 SSYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDAAALSIKG 117 67*****998.**********843...6***********************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
ALCARMAASE QSSESSSTSY ASSYSTSSCS PRADAKKRQD GGNKRKRAAA AGEEEEEAAP 60 AAAAASSSYR GVRMRAWGKW VSEIREPRKK SRIWLGTFPC PEMAARAHDA AALSIKGARA 120 VLNFPDLAPA LPRPASLAPC DVQAAAARAA LMHDHDHQCC SASTSTSPTA APASACGNAP 180 APSDQPAARD EPEHEPEPFQ PSQGSEQQLT AAQVEMVFDE LAPLWVEDVV DFAPSDHCWT 240 AYDCLDPLGY QPLLWEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25810.1 | 6e-32 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG017110.3 |