PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG013430.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 284aa    MW: 31067 Da    PI: 6.7179
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG013430.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-132872347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+ l++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC3AG013430.8 28 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 72
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
CTWASLLRYV IIVSAASNHR PICASGTPWT EEEHRLFLLG LQKLGKGDWR GISRSFVVSR  60
TPTQVASHAQ KYFIRQTNFS RRKRRSSLFD MVPEMPMDES PDGAEEFTLC STQDETSSSN  120
KLSLFHLGRQ KEAECDKDLP TLQLRQHEES EYGGPSLEAP DLEMNNGVSF KAASVSTVPA  180
FYPSLLPVPL TLWPANVSNV EAANASHEVL KPTPVNLKEA IKADEVVSMS KLSIGGGTSG  240
SMEPSALSLQ LTGPTNTRQS AFHVSPPMTR TDLSQGNNSP IHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.19e-43MYB_related family protein