PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG013430.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 277aa    MW: 30338 Da    PI: 6.5152
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG013430.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding422.2e-132165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+ l++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC3AG013430.5 21 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 65
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
DDPMHASCST NGRAERKKGT PWTEEEHRLF LLGLQKLGKG DWRGISRSFV VSRTPTQVAS  60
HAQKYFIRQT NFSRRKRRSS LFDMVPEMPM DESPDGAEEF TLCSTQDETS SSNKLSLFHL  120
GRQKEAECDK DLPTLQLRQH EESEYGGPSL EAPDLEMNNG VSFKAASVST VPAFYPSLLP  180
VPLTLWPANV SNVEAANASH EVLKPTPVNL KEAIKADEVV SMSKLSIGGG TSGSMEPSAL  240
SLQLTGPTNT RQSAFHVSPP MTRTDLSQGN NSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.16e-46MYB_related family protein