PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG013430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 285aa    MW: 31098.8 Da    PI: 6.3139
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG013430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-132973347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+ l++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC3AG013430.1 29 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 73
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
EGAPGYVSDD PMHASCSTNG RAERKKGTPW TEEEHRLFLL GLQKLGKGDW RGISRSFVVS  60
RTPTQVASHA QKYFIRQTNF SRRKRRSSLF DMVPEMPMDE SPDGAEEFTL CSTQDETSSS  120
NKLSLFHLGR QKEAECDKDL PTLQLRQHEE SEYGGPSLEA PDLEMNNGVS FKAASVSTVP  180
AFYPSLLPVP LTLWPANVSN VEAANASHEV LKPTPVNLKE AIKADEVVSM SKLSIGGGTS  240
GSMEPSALSL QLTGPTNTRQ SAFHVSPPMT RTDLSQGNNS PIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.14e-48MYB_related family protein