PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG013180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 407aa    MW: 43717.9 Da    PI: 8.2923
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG013180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.45.1e-08155175526
                       --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                        C++f++ G Ck+Gd C +aHg
  TRIDC3AG013180.1 155 ACPDFRK-GGCKRGDACEYAHG 175
                       7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
STIRPTPTHN KATSLRLRSL LPSPRAEQAE QGQDMMMMSE GVSVPPWGSH LPVSGVDAGG  60
GGGGDETPFL FAALRQYLPC NDLVGAGAGA EDEDEAAAMA AAVDAYACDE FRMYDFKVRR  120
CARGRSHDWT ECPFAHPGEK ARRRDPRKYH YSGTACPDFR KGGCKRGDAC EYAHGVFECW  180
LHPARYRTQP CKDGTACRRR VCFFAHTPDQ LRAMPSQHSS PRSTPLSPLA ESYDGSPLRR  240
QAFESYLSKS IMSSSPTSTL LSSPPKSPPS ESPPLSPDGA ASFRRGSWPG VGSPVNDVLA  300
SLRQLRLAKA QASPSGGWSG YPTSPAAYGS PKGAGLYSLP TTPMGTQTSA SSFMANLEPL  360
NLRFIDDEEP VQRVESGRAL REKVFERLSR DGAAPRSCEV VGAGAGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.19e-83C3H family protein