PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG011980.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 264aa    MW: 28977.1 Da    PI: 8.7525
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG011980.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.3e-1862111255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa+a++ a+++++g
  TRIDC3AG011980.3  62 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 111
                       59****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MNRKKKVRRR STGPDSVAET IKKWKEENQK LQQENGSRKA PAKGSKKGCM AGKGGPENSN  60
CAYRGVRQRT WGKWVAEIRE PNRGNRLWLG SFPTAVEAAR AYDDAARAMY GAKARVNFSE  120
QSPDANSGCT LAPPLLTSNG ATAASHPSDG KDESESPPSL ISNGPTAALR RSDAKDESES  180
AGTVARKVKK EVSNDLRSTH EEHKTLEVSQ PKGKALHKEA NVSYDYFNVE EVLDMIIVEL  240
SADVKMEAHE EYQDGDDGFS LFSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
129NRKKKVRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-33ERF family protein