PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG011980.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 278aa MW: 30394.6 Da PI: 7.9615 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.3 | 7.9e-18 | 76 | 125 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAa+a++ a+++++g TRIDC3AG011980.2 76 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 125 59****999.**********8...2.359***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
METGGSKREG DCPGQERKKK VRRRSTGPDS VAETIKKWKE ENQKLQQENG SRKAPAKGSK 60 KGCMAGKGGP ENSNCAYRGV RQRTWGKWVA EIREPNRGNR LWLGSFPTAV EAARAYDDAA 120 RAMYGAKARV NFSEQSPDAN SGCTLAPPLL TSNGATAASH PSDGKDESES PPSLISNGPT 180 AALRRSDAKD ESESAGTVAR KVKKEVSNDL RSTHEEHKTL EVSQPKGKAL HKEANVSYDY 240 FNVEEVLDMI IVELSADVKM EAHEEYQDGD DGFSLFSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 2e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG011980.2 |