PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG011980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26507.5 Da PI: 10.5012 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.4e-18 | 76 | 125 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAa+a++ a+++++g TRIDC3AG011980.1 76 AYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGSFPTAVEAARAYDDAARAMYG 125 59****999.**********8...2.359***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
METGGSKREG DCPGQERKKK VRRRSTGPDS VAETIKKWKE ENQKLQQENG SRKAPAKGSK 60 KGCMAGKGGP ENSNCAYRGV RQRTWGKWVA EIREPNRGNR LWLGSFPTAV EAARAYDDAA 120 RAMYGAKARV NFSEQSPDAN SGCTLAPPLL TSNGATAASH PSDGKDESES PPSLISNGPT 180 AALRRSDAKD ESESAGTVAR KVKKEVSNDL RSTHEEHKTL EVSQPKGKAL HKEANRKQQK 240 LGRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 2e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG011980.1 |