PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG011280.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 315aa    MW: 36167.3 Da    PI: 7.115
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG011280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.00011109131223
                       EETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                       +C+ C+++++++ +L  Hi+  H
  TRIDC3AG011280.1 109 SCSVCSRVYPTSRLLSIHISEaH 131
                       6******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MQQNPAEAME PSAPSEAEAP KDAGPWLGFW EVSRRRLTPD DPFFAAGDME RELLAKHVAL  60
DLSDDDRYQL EKMDVASVSM VCCPIAGCGA HLDCLEDFED HYSTRHTASC SVCSRVYPTS  120
RLLSIHISEA HDSFFQAKVA RGFPMYECLV EGCGEKLKTY KSRQQHLVDK HQFPNSFEFF  180
KRAQPSQRHR QKYHHRRQTA YKGEETRDTV MDVDGKNPRQ SKPRYRPKQR DHKEPKENEH  240
GHKESKDNEH HEKEAKESDM EVEQKIDELS SAVSRLSTAD SVPSSITFGH RRARGLTFVP  300
RSIRQNKQVS QPEAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-90C2H2 family protein