PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090080.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 305aa    MW: 34197.9 Da    PI: 6.3736
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090080.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.26.6e-53131471129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeek...ewyfFskrdkkyatgkrknratksgyWk 84 
                       +ppGfrFhPt+eelv +yL++kv+++k++l ++i+evd+y++ePwdL++      +   +e+   ewyfFs +d+ky++g+r+nrat++g+Wk
  TRIDC2BG090080.4  13 VPPGFRFHPTEEELVGYYLARKVAAQKIDL-DIIQEVDLYRIEPWDLQAgarqvaE---DEQsssEWYFFSFKDRKYPSGTRTNRATAAGFWK 101
                       69****************************.99**************954664332...222345**************************** PP

               NAM  85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       atg+dk+v+s+ ++ ++g++ktLvfy+grap+g+ktdW++heyrle
  TRIDC2BG090080.4 102 ATGRDKPVTSSrSRGVIGMRKTLVFYRGRAPNGRKTDWIIHEYRLE 147
                       *********9856678****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MDHEHHQQEE SCVPPGFRFH PTEEELVGYY LARKVAAQKI DLDIIQEVDL YRIEPWDLQA  60
GARQVAEDEQ SSSEWYFFSF KDRKYPSGTR TNRATAAGFW KATGRDKPVT SSRSRGVIGM  120
RKTLVFYRGR APNGRKTDWI IHEYRLETSE HAPTQEEGWV VCRAFQKPTP NQRASYVFPA  180
YAAAPGLGGY FDARPWLHGQ AGDLHYLQSA TGSVGAGRLG FPGQSIQYSA ELLDSKQSLF  240
NNIPQLIESP PMTTAVAGCR DAGYDIVQQG QAAAGIDWDF LDSQLSTSQL HEYSATATSH  300
LHLEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.17e-89NAC family protein