PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090080.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 317aa    MW: 35399.3 Da    PI: 6.5103
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090080.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.15.8e-52161591129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkkyatgkrknrat 78 
                       +ppGfrFhPt+eelv +yL++kv+++k++l ++i+evd+y++ePwdL++               + +++++ewyfFs +d+ky++g+r+nrat
  TRIDC2BG090080.3  16 VPPGFRFHPTEEELVGYYLARKVAAQKIDL-DIIQEVDLYRIEPWDLQErcsggrggpgarqvaEDEQSSSEWYFFSFKDRKYPSGTRTNRAT 107
                       69****************************.99**************955899999999885432222445********************** PP

               NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       ++g+Wkatg+dk+v+s+ ++ ++g++ktLvfy+grap+g+ktdW++heyrle
  TRIDC2BG090080.3 108 AAGFWKATGRDKPVTSSrSRGVIGMRKTLVFYRGRAPNGRKTDWIIHEYRLE 159
                       ***************9856678****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MLAMDHEHHQ QEESCVPPGF RFHPTEEELV GYYLARKVAA QKIDLDIIQE VDLYRIEPWD  60
LQERCSGGRG GPGARQVAED EQSSSEWYFF SFKDRKYPSG TRTNRATAAG FWKATGRDKP  120
VTSSRSRGVI GMRKTLVFYR GRAPNGRKTD WIIHEYRLET SEHAPTQEEG WVVCRAFQKP  180
TPNQRASYVF PAYAAAPGLG GYFDARPWLH GQAGDLHYLQ SATGSVGAGR LGFPGQSIQY  240
SAELLDSKQS LFNNIPQLIE SPPMTTAVAG CRDAGYDIVQ QGQAAAGIDW DFLDSQLSTS  300
QLHEYSATAT SHLHLEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-88NAC family protein