PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG089930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 18664.1 Da PI: 9.9386 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.9 | 1.6e-52 | 15 | 154 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............kvkaeek...ewyfFskrdkkyatgkrknrat 78 pGfrFhPtdeelv +yL++kv+++k++l ++i+evd+y++ePwdL++ + + + ewyfFs +d+ky++g+r+nrat TRIDC2BG089930.1 15 SPGFRFHPTDEELVGYYLARKVAAQKIDL-DIIQEVDLYRIEPWDLQErcggrggggarpdQED---QsslEWYFFSFKDRKYPSGTRNNRAT 103 69***************************.99**************955889888887653222...2346********************** PP NAM 79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+Wkatg+dk+v+s+ ++ ++g++ktLvfy+grap+g+ktdW++heyrl TRIDC2BG089930.1 104 AAGFWKATGRDKPVTSSkRRVVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 154 ***************98566779**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MLAMNKHRQE ESCVSPGFRF HPTDEELVGY YLARKVAAQK IDLDIIQEVD LYRIEPWDLQ 60 ERCGGRGGGG ARPDQEDQSS LEWYFFSFKD RKYPSGTRNN RATAAGFWKA TGRDKPVTSS 120 KRRVVIGMRK TLVFYRGRAP NGRKTDWIIH EYRLHTSEHA P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 70 | GGRGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 5e-72 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG089930.1 |