PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG087960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 272aa    MW: 30013.3 Da    PI: 8.6704
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG087960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.92.8e-12148228191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn Y+ e GF +r  ks+ + + +   +++ vC ++gk+  e+++         + +++C a +++ + +d+ w++++ +  HnH+l+p
  TRIDC2BG087960.1 148 DFYNLYSWEKGFGIRYGKSRLNVERT-KCMQEIVCGCSGKAGVENTR---------SCHCECPALIRLLRVEDNGWYIAEHRDTHNHSLSP 228
                       6*****************99995544.67889*******99887555.........999*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEFLLQPIRG STFLEEVGKS LVPPAPPELA SVAAGQHVVD MVVELPVVRQ DTLPPVQQAA  60
SGHAQIVAGP ASAEVRLESS PPSSELSTAK MNPRAPGWNK RLRIGAAAPS RPPCPNRVSA  120
FKKAVRRFAE NPTENVTPVI GTVGQAYDFY NLYSWEKGFG IRYGKSRLNV ERTKCMQEIV  180
CGCSGKAGVE NTRSCHCECP ALIRLLRVED NGWYIAEHRD THNHSLSPNF GETIHWPSHK  240
HIDVYIRDLV KQLRQNNVNL AKVYSIIGGF LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.16e-07FAR1 family protein