PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG077040.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 316aa    MW: 34293.8 Da    PI: 6.3414
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG077040.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2491.5e-1572123155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  TRIDC2BG077040.3  72 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 123
                       57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MLVLHGTGGY DKEEKAARAY DLAALKYWGS STTTNFPVAD YEKEVEEMKH MTRQEFVASL  60
RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK  120
FRGLNAVTNF EIGRYNVESI ISSNLPIGNM SGGAGRGSKA LESSSPEAAA LPVEAPHSLA  180
FTALPMKYDQ QQQDYLSFLA LQHHQQGNLQ GLGYGLYSSG VNLDFANAGP GGAMAPHCYG  240
SNAGDLHLQQ HDQQQQQHEG EGQEQQHDQH HSMGFGASTP MAAFSSGGPY ESSVTAGSFG  300
YYPNVAAFQT PIFGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.15e-83AP2 family protein