PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG077040.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 480aa MW: 51794.9 Da PI: 6.3918

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG077040.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.7	2.1e-11	137	193	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g TRIDC2BG077040.2 137 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 193 57*****************5444.2455536655.779999************98 PP
2	AP2	48.2	2.8e-15	236	287	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC2BG077040.2 236 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 287 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MDMDAAHGHY PWLNFSLAHH CEMGEEERGA AAELAAIAGA GPPPKLEDFL GGGANGNHNG 60 RNNNDAGRGD QVVSAATAEM YDSELKFLAA GFLGGATGTT APTISPAAAP QEQADPKMPA 120 PAPEQKKAVD SFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA 180 ARAYDLAALK YWGSSTTTNF PVADYEKEVE EMKHMTRQEF VASLRRKSSG FSRGASIYRG 240 VTRHHQHGRW QARIGRVAGN KDLYLGTFST EEEAAEAYDI AAIKFRGLNA VTNFEIGRYN 300 VESIISSNLP IGNMSGGAGR GSKALESSSP EAAALPVEAP HSLAFTALPM KYDQQQQDYL 360 SFLALQHHQQ GNLQGLGYGL YSSGVNLDFA NAGPGGAMAP HCYGSNAGDL HLQQHDQQQQ 420 QHEGEGQEQQ HDQHHSMGFG ASTPMAAFSS GGPYESSVTA GSFGYYPNVA AFQTPIFGME

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MDMDAAHGHY PWLNFSLAHH CEMGEEERGA AAELAAIAGA GPPPKLEDFL GGGANGNHNG  60
RNNNDAGRGD QVVSAATAEM YDSELKFLAA GFLGGATGTT APTISPAAAP QEQADPKMPA  120
PAPEQKKAVD SFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA  180
ARAYDLAALK YWGSSTTTNF PVADYEKEVE EMKHMTRQEF VASLRRKSSG FSRGASIYRG  240
VTRHHQHGRW QARIGRVAGN KDLYLGTFST EEEAAEAYDI AAIKFRGLNA VTNFEIGRYN  300
VESIISSNLP IGNMSGGAGR GSKALESSSP EAAALPVEAP HSLAFTALPM KYDQQQQDYL  360
SFLALQHHQQ GNLQGLGYGL YSSGVNLDFA NAGPGGAMAP HCYGSNAGDL HLQQHDQQQQ  420
QHEGEGQEQQ HDQHHSMGFG ASTPMAAFSS GGPYESSVTA GSFGYYPNVA AFQTPIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-118	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG077040.2