PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG074990.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 749aa MW: 82305.4 Da PI: 5.7016

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG074990.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.2	1.9e-10	2	44	55	99
ETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 55 ksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++r++lt+GW+ Fv a++Lk+gD+v+F ++++ +l+v+v+r+ TRIDC2BG074990.8 2 QPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RDEKSQLLVGVRRA 44 5789***********************..4577778***97 PP
2	Auxin_resp	114.1	1.3e-37	69	151	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+ TRIDC2BG074990.8 69 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 151 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
GQPKRHLLTT GWSLFVGAKR LKAGDSVLFI RDEKSQLLVG VRRATNQQTA LSSSVLSTDS 60 MHIGVLAAAA HAASSGSSFT IYYNPRTSPS PFVVPVARYN KANYIQQSVG MRMAMMFETE 120 ESSKRRYTGT IVGVSDSDPM RWPNSKWRNL QIEWDEHGYG ERPERVSIWD IETPENTIVF 180 PSASLNSKRQ CLPGYGVPGL DIASVNMSPF QRAPGNPYGN LQHMPAVGSE LAMMMFLNQS 240 GQNIGTPLSC HQSSYSSIIQ NVKQNYMPPS TFGHPIGSIK PESMPSNEAQ QQQLHAPKMQ 300 RGNSESCEVQ PATDSVSASE LHVAGREPRN TDKSPSQSIS EQNGKGEPRV KPRRSKKGSS 360 HKTISENSEL SSAPSRFCDD QQHVSEAELV SCDTKHVNCG NNEGSSGALT HGDFAGQLQC 420 QQVEQNELVS PPKLESSISP DGGKSVNSFP NQASFSQFFD GLDWMVQPPY YQDSNGIQSV 480 SASENIFSPS ANIGSTINTD TLETFQNSCL SDCFPNSIQD FIGSPDLHSL TFLSPEMQNL 540 DVHHDGSNVP STSNSYVQMS FSEDDSGSHM ESIQRGMNNI SSCSQPQTTE GFNLGMYSKL 600 PSLKESQVLS LPEIHNSSRG TSSCSMDAAE YSIDRSAKPL KPPVRTYTKV QKLGSVGRSI 660 DVTRYRDYRE LRSAIASMFG LQGKLEHPAS SDWKLVYVDY ENDVLLVGDD PWEEFINCVR 720 CIRILSPSEV QQMSENGMQV LNDCIQADQ

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

GQPKRHLLTT GWSLFVGAKR LKAGDSVLFI RDEKSQLLVG VRRATNQQTA LSSSVLSTDS  60
MHIGVLAAAA HAASSGSSFT IYYNPRTSPS PFVVPVARYN KANYIQQSVG MRMAMMFETE  120
ESSKRRYTGT IVGVSDSDPM RWPNSKWRNL QIEWDEHGYG ERPERVSIWD IETPENTIVF  180
PSASLNSKRQ CLPGYGVPGL DIASVNMSPF QRAPGNPYGN LQHMPAVGSE LAMMMFLNQS  240
GQNIGTPLSC HQSSYSSIIQ NVKQNYMPPS TFGHPIGSIK PESMPSNEAQ QQQLHAPKMQ  300
RGNSESCEVQ PATDSVSASE LHVAGREPRN TDKSPSQSIS EQNGKGEPRV KPRRSKKGSS  360
HKTISENSEL SSAPSRFCDD QQHVSEAELV SCDTKHVNCG NNEGSSGALT HGDFAGQLQC  420
QQVEQNELVS PPKLESSISP DGGKSVNSFP NQASFSQFFD GLDWMVQPPY YQDSNGIQSV  480
SASENIFSPS ANIGSTINTD TLETFQNSCL SDCFPNSIQD FIGSPDLHSL TFLSPEMQNL  540
DVHHDGSNVP STSNSYVQMS FSEDDSGSHM ESIQRGMNNI SSCSQPQTTE GFNLGMYSKL  600
PSLKESQVLS LPEIHNSSRG TSSCSMDAAE YSIDRSAKPL KPPVRTYTKV QKLGSVGRSI  660
DVTRYRDYRE LRSAIASMFG LQGKLEHPAS SDWKLVYVDY ENDVLLVGDD PWEEFINCVR  720
CIRILSPSEV QQMSENGMQV LNDCIQADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	4e-87	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG074990.8