PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG074990.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 775aa MW: 85585.2 Da PI: 5.8826

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG074990.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.5	5e-18	6	70	33	99
-SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++l+++d++ + W++++iyr++++r++lt+GW+ Fv a++Lk+gD+v+F ++++ +l+v+v+r+ TRIDC2BG074990.6 6 NQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--RDEKSQLLVGVRRA 70 3589*********************************************..4577778***97 PP
2	Auxin_resp	114	1.4e-37	95	177	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaas++s F+++YnPr+s+s Fvv+v++++ka +++ svGmR+ m+fete+ss+rr++Gt+vgvsd+dp+rWpnSkWr+L+ TRIDC2BG074990.6 95 AAHAASSGSSFTIYYNPRTSPSPFVVPVARYNKANYIQQSVGMRMAMMFETEESSKRRYTGTIVGVSDSDPMRWPNSKWRNLQ 177 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
SMQPPNQELI VRDLHDNMWT FRHIYRGQPK RHLLTTGWSL FVGAKRLKAG DSVLFIRDEK 60 SQLLVGVRRA TNQQTALSSS VLSTDSMHIG VLAAAAHAAS SGSSFTIYYN PRTSPSPFVV 120 PVARYNKANY IQQSVGMRMA MMFETEESSK RRYTGTIVGV SDSDPMRWPN SKWRNLQIEW 180 DEHGYGERPE RVSIWDIETP ENTIVFPSAS LNSKRQCLPG YGVPGLDIAS VNMSPFQRAP 240 GNPYGNLQHM PAVGSELAMM MFLNQSGQNI GTPLSCHQSS YSSIIQNVKQ NYMPPSTFGH 300 PIGSIKPESM PSNEAQQQQL HAPKMQRGNS ESCEVQPATD SVSASELHVA GREPRNTDKS 360 PSQSISEQNG KGEPRVKPRR SKKGSSHKTI SENSELSSAP SRFCDDQQHV SEAELVSCDT 420 KHVNCGNNEG SSGALTHGDF AGQLQCQQVE QNELVSPPKL ESSISPDGGK SVNSFPNQAS 480 FSQFFDGLDW MVQPPYYQDS NGIQSVSASE NIFSPSANIG STINTDTLET FQNSCLSDCF 540 PNSIQDFIGS PDLHSLTFLS PEMQNLDVHH DGSNVPSTSN SYVQMSFSED DSGSHMESIQ 600 RGMNNISSCS QPQTTEGFNL GMYSKLPSLK ESQVLSLPEI HNSSRGTSSC SMDAAEYSID 660 RSAKPLKPPV RTYTKVQKLG SVGRSIDVTR YRDYRELRSA IASMFGLQGK LEHPASSDWK 720 LVYVDYENDV LLVGDDPWEE FINCVRCIRI LSPSEVQQMS ENGMQVLNDC IQADQ

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

SMQPPNQELI VRDLHDNMWT FRHIYRGQPK RHLLTTGWSL FVGAKRLKAG DSVLFIRDEK  60
SQLLVGVRRA TNQQTALSSS VLSTDSMHIG VLAAAAHAAS SGSSFTIYYN PRTSPSPFVV  120
PVARYNKANY IQQSVGMRMA MMFETEESSK RRYTGTIVGV SDSDPMRWPN SKWRNLQIEW  180
DEHGYGERPE RVSIWDIETP ENTIVFPSAS LNSKRQCLPG YGVPGLDIAS VNMSPFQRAP  240
GNPYGNLQHM PAVGSELAMM MFLNQSGQNI GTPLSCHQSS YSSIIQNVKQ NYMPPSTFGH  300
PIGSIKPESM PSNEAQQQQL HAPKMQRGNS ESCEVQPATD SVSASELHVA GREPRNTDKS  360
PSQSISEQNG KGEPRVKPRR SKKGSSHKTI SENSELSSAP SRFCDDQQHV SEAELVSCDT  420
KHVNCGNNEG SSGALTHGDF AGQLQCQQVE QNELVSPPKL ESSISPDGGK SVNSFPNQAS  480
FSQFFDGLDW MVQPPYYQDS NGIQSVSASE NIFSPSANIG STINTDTLET FQNSCLSDCF  540
PNSIQDFIGS PDLHSLTFLS PEMQNLDVHH DGSNVPSTSN SYVQMSFSED DSGSHMESIQ  600
RGMNNISSCS QPQTTEGFNL GMYSKLPSLK ESQVLSLPEI HNSSRGTSSC SMDAAEYSID  660
RSAKPLKPPV RTYTKVQKLG SVGRSIDVTR YRDYRELRSA IASMFGLQGK LEHPASSDWK  720
LVYVDYENDV LLVGDDPWEE FINCVRCIRI LSPSEVQQMS ENGMQVLNDC IQADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19850.1	1e-105	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG074990.6